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注释数据库
主要是基因功能注释,包括了一些其他种类数据库
文献数据库
国外生物学医学相关数据库和工具,以及塔大买的数据库
在线分析工具和数据库——核酸类
核酸类常用生信在线分析工具,用法参考相应官网,部分提供了程序和API接口
![](https://www.shelven.com/tuchuang/wangzhan/BLAST.jpg)
BLAST
![](https://www.shelven.com/tuchuang/wangzhan/ClustalOmega.jpg)
Clustal Omega
![](https://www.shelven.com/tuchuang/wangzhan/orffinder.jpg)
ORF Finder
![](https://www.shelven.com/tuchuang/wangzhan/softberry.jpg)
Softberry
![](https://www.shelven.com/tuchuang/wangzhan/genscan.jpg)
GenScan
![](https://www.shelven.com/tuchuang/wangzhan/Augustus.jpg)
Augustus
![](https://www.shelven.com/tuchuang/wangzhan/GeneMark.jpg)
GeneMark
![](https://www.shelven.com/tuchuang/wangzhan/CPAT.jpg)
CPAT
![](https://www.shelven.com/tuchuang/wangzhan/BDGP.jpg)
BDGP
![](https://www.shelven.com/tuchuang/wangzhan/Promoter.jpg)
Promoter2.0
![](https://www.shelven.com/tuchuang/wangzhan/JASPAR.jpg)
JASPAR
![](https://www.shelven.com/tuchuang/wangzhan/PlantPAN3.0.jpg)
PlantPAN3.0
![](https://www.shelven.com/tuchuang/wangzhan/miRBase.jpg)
miRBase
![](https://www.shelven.com/tuchuang/wangzhan/miRDB.jpg)
miRDB
![](https://www.shelven.com/tuchuang/wangzhan/WMD3.jpg)
WMD3
![](https://www.shelven.com/tuchuang/wangzhan/ChromLoops.jpg)
ChromLoops
![](https://www.shelven.com/tuchuang/wangzhan/HarvEST.jpg)
HarvEST
![](https://www.shelven.com/tuchuang/wangzhan/AraQTL.jpg)
AraQTL
![](https://www.shelven.com/tuchuang/wangzhan/PlantCARE.jpg)
PlantCARE
![](https://www.shelven.com/tuchuang/wangzhan/PlantTFDB.jpg)
PlantTFDB
![](https://www.shelven.com/tuchuang/wangzhan/PlantExp.jpg)
PlantExp
![](https://www.shelven.com/tuchuang/wangzhan/uORFlight.jpg)
uORFlight
![](https://www.shelven.com/tuchuang/wangzhan/CR-EST.jpg)
CR-EST
![](https://www.shelven.com/tuchuang/wangzhan/PLACE.jpg)
PLACE
![](https://www.shelven.com/tuchuang/wangzhan/ATTED-II.jpg)
ATTED-II
![](https://www.shelven.com/tuchuang/wangzhan/plantcircbase.jpg)
plantcircbase
![](https://www.shelven.com/tuchuang/wangzhan/PGED.jpg)
PGED
![](https://www.shelven.com/tuchuang/wangzhan/CRISPR-GE.jpg)
CRISPR-GE
![](https://www.shelven.com/tuchuang/wangzhan/PRGdb.jpg)
PRGdb
![](https://www.shelven.com/tuchuang/wangzhan/Plant_Promoter_Database.jpg)
Plant Promoter Database
![](https://www.shelven.com/tuchuang/wangzhan/PlantProm_DB.jpg)
PlantProm DB
![](https://www.shelven.com/tuchuang/wangzhan/PlantMethylome.jpg)
PlantMethylome
![](https://www.shelven.com/tuchuang/wangzhan/Plant_Regulomics.jpg)
Plant Regulomics
![](https://www.shelven.com/tuchuang/wangzhan/ASMdb.jpg)
ASMdb
![](https://www.shelven.com/tuchuang/wangzhan/autosnpdb.jpg)
autosnpdb
![](https://www.shelven.com/tuchuang/wangzhan/PlantNATsDB.jpg)
PlantNATsDB
![](https://www.shelven.com/tuchuang/wangzhan/PlantscRNAdb.jpg)
PlantscRNAdb
![](https://www.shelven.com/tuchuang/wangzhan/LIRBase.jpg)
LIRBase
![](https://www.shelven.com/tuchuang/wangzhan/PlantDeepSEA.jpg)
PlantDeepSEA
在线分析工具和数据库——蛋白类
蛋白类常用生信在线分析工具,用法参考相应官网,部分提供了程序和API接口
![](https://www.shelven.com/tuchuang/wangzhan/Expasy.jpg)
Expasy
![](https://www.shelven.com/tuchuang/wangzhan/DTU.dk.jpg)
DTU.dk
![](https://www.shelven.com/tuchuang/wangzhan/ANTHEPROT.jpg)
ANTHEPROT 3D
![](https://www.shelven.com/tuchuang/wangzhan/protparam.jpg)
ProtParam
![](https://www.shelven.com/tuchuang/wangzhan/ProtScale.jpg)
ProtScale
![](https://www.shelven.com/tuchuang/wangzhan/scanprosite.jpg)
ScanProsite
![](https://www.shelven.com/tuchuang/wangzhan/Prosite.jpg)
Prosite
![](https://www.shelven.com/tuchuang/wangzhan/ConservedDomains.jpg)
Conserved Domains
![](https://www.shelven.com/tuchuang/wangzhan/SMART.jpg)
SMART
![](https://www.shelven.com/tuchuang/wangzhan/predictprotein.jpg)
Predict Protein
![](https://www.shelven.com/tuchuang/wangzhan/SOPMA.jpg)
SOPMA
![](https://www.shelven.com/tuchuang/wangzhan/Paircoil2.jpg)
Paircoil2
![](https://www.shelven.com/tuchuang/wangzhan/Phyre2.jpg)
Phyre2
![](https://www.shelven.com/tuchuang/wangzhan/SWISS-MODEL.jpg)
SWISS-MODEL
![](https://www.shelven.com/tuchuang/wangzhan/SOSUI.jpg)
SOSUI
![](https://www.shelven.com/tuchuang/wangzhan/CCTOP.jpg)
CCTOP
![](https://www.shelven.com/tuchuang/wangzhan/TMHMM-2.0.jpg)
TMHMM-2.0
![](https://www.shelven.com/tuchuang/wangzhan/imp-motif-tools.jpg)
IMP Motif Tools
![](https://www.shelven.com/tuchuang/wangzhan/GPI-SOM.jpg)
GPI-SOM
![](https://www.shelven.com/tuchuang/wangzhan/SignalP.jpg)
SignalP-5.0
![](https://www.shelven.com/tuchuang/wangzhan/signal-3l.jpg)
Signal-3L
![](https://www.shelven.com/tuchuang/wangzhan/NetOGlyc.jpg)
NetOGlyc-4.0
![](https://www.shelven.com/tuchuang/wangzhan/NetNGlyc.jpg)
NetNGlyc-1.0
![](https://www.shelven.com/tuchuang/wangzhan/NetAcet.jpg)
NetAcet-1.0
![](https://www.shelven.com/tuchuang/wangzhan/NetPhos.jpg)
NetPhos-3.1
![](https://www.shelven.com/tuchuang/wangzhan/P3DB.jpg)
P3DB
![](https://www.shelven.com/tuchuang/wangzhan/PrePS.jpg)
PrePS
![](https://www.shelven.com/tuchuang/wangzhan/SUMOplot.jpg)
SUMOplot
![](https://www.shelven.com/tuchuang/wangzhan/PSORT.jpg)
PSORT
![](https://www.shelven.com/tuchuang/wangzhan/CELLO.jpg)
CELLO
![](https://www.shelven.com/tuchuang/wangzhan/TargetP.jpg)
TargetP-2.0
![](https://www.shelven.com/tuchuang/wangzhan/MPIC.jpg)
MPIC
![](https://www.shelven.com/tuchuang/wangzhan/FAT-PTM.jpg)
FAT-PTM
![](https://www.shelven.com/tuchuang/wangzhan/qPTMplants.jpg)
qPTMplants
![](https://www.shelven.com/tuchuang/wangzhan/Plant_PTM_Viewer.jpg)
Plant PTM Viewer
![](https://www.shelven.com/tuchuang/wangzhan/plant_MAP.jpg)
plant.MAP
模式生物和农作物数据库
模式生物和主要的农作物数据库,部分数据库也自带基因组浏览器功能
植物比较基因组数据库
其他工具及数据库
交换友链请参照下列格式并留言
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